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projects:writing [Bob Baddeley]

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Publications from Work

PNNL

Here are some of the papers I’ve been in since working at the lab. This isn’t a complete list, and I’ll be the first to admit that I’m not the first author on most of them, but here they are. I’m particularly proud of the variety of topics that these papers cover. I like working on a variety of projects and sometimes even have the pleasure of tying them together sometimes. Besides these papers, there have also been a significant number of presentations at conferences, to clients, and to potential clients, as well as abstracts, posters, and videos. Here are the important papers:

  • Peterson DJ, AP Sanfilippo, RL Baddeley, and L Franklin. 2008. “Proactive Intelligence for Nuclear Nonproliferation (aka Predictive Analysis for Nuclear Nonproliferation).” In International Studies Association (ISA) 2008 Convention, San Francisco, CA (online paper archive); 8th International Conference on Facility Operations-Safeguards Interface, Portland, OR. PNNL-SA-60207, Pacific Northwest National Laboratory
  • Baddeley RL, K Younkin, RM Riensche, DM Best, WA Pike, and RA May, II. 2008. “From Desktop to Field: Deploying Visual Incident Analysis for Law Enforcement.” In 2008 IEEE International Conference on Technologies for Homeland Security. PNNL-SA-59690, Pacific Northwest National Laboratory
  • Riensche RM, B Baddeley, AP Sanfilippo, C Posse, and B Gopalan. 2007. “XOA: Web-Enabled Cross-Ontological Analytics.” In 2007 IEEE Congress on Services, 9-13 July 2007, Salt Lake City, UT , pp. 99-105. Institute of Electrical and Electronics Engineers, Piscataway, NJ. doi:10.1109/SERVICES.2007.73
  • Pike WA, RA May, II, B Baddeley, RM Riensche, J Bruce, and K Younkin. 2007. “Scalable Visual Reasoning: Supporting Collaboration through Distributed Analysis.” In 2007 International Symposium on Collaborative Technologies and Systems, pp. 24-32. IEEE Press, New York, NY.
  • Sanfilippo AP, C Posse, B Gopalan, RM Riensche, N Beagley, BL Baddeley, SC Tratz, and ML Gregory. 2007. “Combining Hierarchical and Associative Gene Ontology Relations with Textual Evidence in Estimating Gene and Gene Product Similarity.” IEEE Transactions on NanoBioscience 6(1):51-59. doi:10.1109/TNB.2007.891886
  • May RA, II, and BL Baddeley. 2005. “Architecture and Performance of the HI-Space Projector-Camera Interface.” In Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR’05), vol. 3, pp. 103-103. IEEE Computer Society, Los Alamitos, CA. doi:10.1109/CVPR.2005.413
  • Sanfilippo AP, BL Baddeley, AJ Cowell, ML Gregory, RE Hohimer, and SC Tratz. 2005. “Building a Human Information Discourse Interface to Uncover Scenario Content.” In 2005 International Conference on Intelligence Analysis . Mitre Website, McLean, VA.
  • Sanfilippo AP, RA May, II, GR Danielson, BL Baddeley, RM Riensche, S Collins, SE Thornton, K Washington, M Schrager, J Van Randwyk, B Borchers, and D Gatchell. 2005. “InfoStar: An Adaptive Visual Analytics Platform for Mobile Devices .” In MCMP ‘05 First International Workshop on Managing Context Information in Mobile and Pervasive Environments held in Ayia Napa, Cyprus, May 9, 2005, ed. W. Mansoor. RWTH-AACHEN, Aachen, Germany.
  • Posse C, AP Sanfilippo, B Gopalan, RM Riensche, N Beagley, and BL Baddeley. 2006. “Cross-Ontological Analytics: Combining Associative and Hierarchical Relations in the Gene Ontologies to Assess Gene Product Similarity.” In Computational Science – ICCS 2006: 6th International Conference, Reading, UK, May 28-31, 2006. Proceedings, Part II : 2006 International Workshop on Bioinformatics Research and Applications, IWBRA’06, vol. 3992, ed. VN Alexandrov, GD van Albada, PMA. Sloot, J Dongarra, pp. 871-878. Springer, Berlin/Heidelberg, Germany. doi:10.1007/11758525_116
  • Sanfilippo AP, SC Tratz, ML Gregory, AR Chappell, PD Whitney, C Posse, PR Paulson, BL Baddeley, RE Hohimer, and AM White. 2005. “Automating Ontological Annotation with WordNet.” In Proceedings of the Third International Global WordNet Conference.
  • Gopalan B, C Posse, AP Sanfilippo, RM Riensche, N Beagley, BL Baddeley, S Stevens, M Stenzel-Poore, R Simon, J Castano, and J Pustejovsky. 2006. “Aligning ontologies and integrating textual evidence for pathway analysis of microarray data.” In ISMB 2006.
  • May RA, II, JJ Thomas, BL Baddeley, and DS Jen. 2005. Progress Report: (July 2004 - March 2005) Application-Driven Research, Development, and Evaluation of Interactive Scientific Visualization Techniques in Multiple Working Environments .
  • May RA, II, AP Sanfilippo, RM Riensche, and RL Baddeley. 2005. “Infostar: Real Time Access to Supercomputing Conference Information .”
  • Sanfilippo AP, BL Baddeley, ML Gregory, RE Hohimer, PR Paulson, C Posse, SC Tratz, AM White, and PD Whitney. 2005. “Ontological Annotation.”
  • Sanfilippo AP, ML Gregory, AD Cowell, BL Baddeley, and SC Tratz. 2005. “A Discourse-based Visual Interactive Environment for Event Analytics and Scenario Construction.”
  • Sanfilippo AP, BL Baddeley, AJ Cowell, ML Gregory, RE Hohimer, and SC Tratz. 2005. “Building a Human Information Discourse Interface to Uncover Scenario Content.”
  • Sanfilippo AP, BL Baddeley, AJ Cowell, ML Gregory, RE Hohimer, PR Paulson, and SC Tratz. 2005. “Building a Human Information Discourse Interface to Uncover Scenario Content.”
  • Sanfilippo AP, SC Tratz, ML Gregory, AR Chappell, PD Whitney, C Posse, PR Paulson, BL Baddeley, RE Hohimer, and AM White. 2005. “Ontological Annotation.”
  • Sanfilippo AP, SC Tratz, ML Gregory, AM Chappel, PD Whitney, C Posse, BL Baddeley, RE Hohimer, PR Paulson, and AM White. 2005. “Using WordNet to Automate Ontological Annotation.”
 

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Copyright 2007, Bob Baddeley

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